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Peptide record

TPDB49015

Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB49015
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 100-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
AFVLDADNLIPKKITFGEGSQYGYVKVEGDALSDTLEKIDYETKLVSAPSSSTIIKTTSKYHTKGDVEIKEEHVKAGKEKAAHLFKLIEGYLKDHPSEYN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C502H789N125O159
RCMW
K
11119.53
5.74
18
17
37
-3
1.64
-0.560
82.90
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
8940
0.80
24
Residue Composition
number
7
A
0
R
2
N
7
D
0
C
10
E
1
Q
7
G
4
H
7
I
8
L
14
K
0
M
3
F
3
P
8
S
7
T
0
W
6
Y
6
V
Amino Acid Distribution
A: 7 R: 0 N: 2 D: 7 C: 0 E: 10 Q: 1 G: 7 H: 4 I: 7 L: 8 K: 14 M: 0 F: 3 P: 3 S: 8 T: 7 W: 0 Y: 6 V: 6
Chemical Descriptors
100 reviewed residue count
C502H789N125O159 sequence-only estimate (linear, free termini)
11119.53 sequence-only estimate (linear, free termini)
5.74 sequence-only estimate (linear, free termini)
-3 sequence-only estimate (linear, free termini)
1.64 sequence-only estimate (linear, free termini)
-0.560 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.