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Peptide record

TPDB48999

Antifungal standard
51 amino acids
Basic Information
3D PDB MODEL
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TPDB48999
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 51-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
KSMAKAQGGWYLVEGLCSKFPDCNKHCKEQGFLGGQCLKLGVNMLCFCIHT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C247H387N67O67S8
R
G
5623.68
8.31
8
3
18
+3
0.55
-0.004
68.82
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
7365
1.31
15
Residue Composition
number
2
A
0
R
2
N
1
D
6
C
2
E
3
Q
7
G
2
H
1
I
6
L
6
K
2
M
3
F
1
P
2
S
1
T
1
W
1
Y
2
V
Amino Acid Distribution
A: 2 R: 0 N: 2 D: 1 C: 6 E: 2 Q: 3 G: 7 H: 2 I: 1 L: 6 K: 6 M: 2 F: 3 P: 1 S: 2 T: 1 W: 1 Y: 1 V: 2
Chemical Descriptors
51 reviewed residue count
C247H387N67O67S8 sequence-only estimate (linear, free termini)
5623.68 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.55 sequence-only estimate (linear, free termini)
-0.004 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.