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Peptide record

TPDB48987

Antifungal standard
59 amino acids
Basic Information
3D PDB MODEL
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TPDB48987
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 59-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SDDTQGFGIKQEYKQCYTPDPCRKGGNDECERFCVAKSGLLYGKCINDGSKDVCCCLTK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C273H431N77O92S8
HMW
C
6520.37
6.20
9
9
13
-0
2.24
-0.737
44.58
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
4970
0.76
22
Residue Composition
number
1
A
2
R
2
N
6
D
8
C
3
E
3
Q
7
G
0
H
2
I
3
L
7
K
0
M
2
F
2
P
3
S
3
T
0
W
3
Y
2
V
Amino Acid Distribution
A: 1 R: 2 N: 2 D: 6 C: 8 E: 3 Q: 3 G: 7 H: 0 I: 2 L: 3 K: 7 M: 0 F: 2 P: 2 S: 3 T: 3 W: 0 Y: 3 V: 2
Chemical Descriptors
59 reviewed residue count
C273H431N77O92S8 sequence-only estimate (linear, free termini)
6520.37 sequence-only estimate (linear, free termini)
6.20 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
2.24 sequence-only estimate (linear, free termini)
-0.737 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.