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Peptide record

TPDB48986

Antifungal standard
69 amino acids
Basic Information
3D PDB MODEL
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TPDB48986
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 69-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VRHNLAVGDVCATNEECRINCQCDAAYCDLSCNMCVYMLHVMDTIDANIPNQPCISEYQNCGKKTSSLQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C314H502N92O107S12
FW
C
7662.71
4.49
6
8
24
-4
1.68
-0.167
73.48
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
4970
0.65
30
Residue Composition
number
5
A
2
R
7
N
5
D
9
C
3
E
4
Q
2
G
2
H
4
I
4
L
2
K
3
M
0
F
2
P
4
S
3
T
0
W
3
Y
5
V
Amino Acid Distribution
A: 5 R: 2 N: 7 D: 5 C: 9 E: 3 Q: 4 G: 2 H: 2 I: 4 L: 4 K: 2 M: 3 F: 0 P: 2 S: 4 T: 3 W: 0 Y: 3 V: 5
Chemical Descriptors
69 reviewed residue count
C314H502N92O107S12 sequence-only estimate (linear, free termini)
7662.71 sequence-only estimate (linear, free termini)
4.49 sequence-only estimate (linear, free termini)
-4 sequence-only estimate (linear, free termini)
1.68 sequence-only estimate (linear, free termini)
-0.167 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.