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Peptide record

TPDB48984

Antifungal standard
55 amino acids
Basic Information
3D PDB MODEL
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TPDB48984
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 55-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RMSGDVTIQRGGSCNNDNTCHDTCPGCRITQCIFRQCVCTRCNTPRSSLRIESHM
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C242H403N87O82S10
AKWY
C
6164.00
8.11
9
4
10
+3
3.05
-0.593
46.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
500
0.08
26
Residue Composition
number
0
A
7
R
4
N
3
D
8
C
1
E
3
Q
4
G
2
H
4
I
1
L
0
K
2
M
1
F
2
P
5
S
6
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 7 N: 4 D: 3 C: 8 E: 1 Q: 3 G: 4 H: 2 I: 4 L: 1 K: 0 M: 2 F: 1 P: 2 S: 5 T: 6 W: 0 Y: 0 V: 2
Chemical Descriptors
55 reviewed residue count
C242H403N87O82S10 sequence-only estimate (linear, free termini)
6164.00 sequence-only estimate (linear, free termini)
8.11 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.05 sequence-only estimate (linear, free termini)
-0.593 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.