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Peptide record

TPDB48980

Antifungal standard
47 amino acids
Basic Information
3D PDB MODEL
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TPDB48980
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 47-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
DYKFHVCDPSFDEKDCDFECKEFGHPGGYCRPDRVQPRIRMCYCTDR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C243H356N70O74S7
ANLW
D
5666.34
5.39
10
10
11
-2
3.32
-1.087
20.64
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
4845
0.86
12
Residue Composition
number
0
A
5
R
0
N
7
D
6
C
3
E
1
Q
3
G
2
H
1
I
0
L
3
K
1
M
4
F
4
P
1
S
1
T
0
W
3
Y
2
V
Amino Acid Distribution
A: 0 R: 5 N: 0 D: 7 C: 6 E: 3 Q: 1 G: 3 H: 2 I: 1 L: 0 K: 3 M: 1 F: 4 P: 4 S: 1 T: 1 W: 0 Y: 3 V: 2
Chemical Descriptors
47 reviewed residue count
C243H356N70O74S7 sequence-only estimate (linear, free termini)
5666.34 sequence-only estimate (linear, free termini)
5.39 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
3.32 sequence-only estimate (linear, free termini)
-1.087 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.