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Peptide record

TPDB48973

Antifungal standard
69 amino acids
Basic Information
3D PDB MODEL
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TPDB48973
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 69-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
HDSECLKEYGGDVGFGFCAPKIFPTICYRNCQKDKGANGGKCLWGEGGKVKCLCDFCSNESFNQFISLT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C331H498N88O100S8
M
G
7566.60
6.70
9
8
20
-0
1.32
-0.316
50.87
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
8980
1.19
22
Residue Composition
number
2
A
1
R
4
N
4
D
8
C
4
E
2
Q
10
G
1
H
3
I
4
L
7
K
0
M
6
F
2
P
4
S
2
T
1
W
2
Y
2
V
Amino Acid Distribution
A: 2 R: 1 N: 4 D: 4 C: 8 E: 4 Q: 2 G: 10 H: 1 I: 3 L: 4 K: 7 M: 0 F: 6 P: 2 S: 4 T: 2 W: 1 Y: 2 V: 2
Chemical Descriptors
69 reviewed residue count
C331H498N88O100S8 sequence-only estimate (linear, free termini)
7566.60 sequence-only estimate (linear, free termini)
6.70 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.32 sequence-only estimate (linear, free termini)
-0.316 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.