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Peptide record

TPDB48968

Antifungal standard
60 amino acids
Basic Information
3D PDB MODEL
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TPDB48968
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 60-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VLKPMDQCGRKDIFLGGCGSNGSKTCINDFVKKGGVAAKPSSCECDDFGEEHLCRCYVPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C270H429N77O86S9
W
CG
6418.38
6.70
9
8
16
-0
1.56
-0.270
55.17
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
1990
0.31
17
Residue Composition
number
2
A
2
R
2
N
5
D
8
C
3
E
1
Q
8
G
1
H
2
I
3
L
6
K
1
M
3
F
3
P
4
S
1
T
0
W
1
Y
4
V
Amino Acid Distribution
A: 2 R: 2 N: 2 D: 5 C: 8 E: 3 Q: 1 G: 8 H: 1 I: 2 L: 3 K: 6 M: 1 F: 3 P: 3 S: 4 T: 1 W: 0 Y: 1 V: 4
Chemical Descriptors
60 reviewed residue count
C270H429N77O86S9 sequence-only estimate (linear, free termini)
6418.38 sequence-only estimate (linear, free termini)
6.70 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.56 sequence-only estimate (linear, free termini)
-0.270 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.