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Peptide record

TPDB48957

Antifungal standard
23 amino acids
Basic Information
3D PDB MODEL
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TPDB48957
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 23-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
ATKVKAKQRGKEKVSSGRPGQHN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C104H183N39O32
DCILMFWY
K
2491.84
11.68
8
1
4
+6
3.55
-1.687
33.91
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
6
Residue Composition
number
2
A
2
R
1
N
0
D
0
C
1
E
2
Q
3
G
1
H
0
I
0
L
5
K
0
M
0
F
1
P
2
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 2 N: 1 D: 0 C: 0 E: 1 Q: 2 G: 3 H: 1 I: 0 L: 0 K: 5 M: 0 F: 0 P: 1 S: 2 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
23 reviewed residue count
C104H183N39O32 sequence-only estimate (linear, free termini)
2491.84 sequence-only estimate (linear, free termini)
11.68 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.55 sequence-only estimate (linear, free termini)
-1.687 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.