TPDB

3D PDB MODEL

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TPDB ID TPDB48947

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 15-aa standard natural antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.

Sequence

EQPGGDKVNLGYFTN

FASTA

>TPDB48947|Antifungal|length=15
EQPGGDKVNLGYFTN

Formula C72H107N19O25

Absent Amino Acids ARCHIMSW

Common Amino Acids G

Mass 1638.75

PI 4.07

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 4

Net Charge -1

Boman Index 3.72

Hydrophobicity -1.027

Aliphatic Index 45.33

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 90.92

Polar Residues 5

number

0

A

0

R

2

N

1

D

0

C

1

E

1

Q

3

G

0

H

0

I

1

L

1

K

0

M

1

F

1

P

0

S

1

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 2 D: 1 C: 0 E: 1 Q: 1 G: 3 H: 0 I: 0 L: 1 K: 1 M: 0 F: 1 P: 1 S: 0 T: 1 W: 0 Y: 1 V: 1

Length

15

Formula

C72H107N19O25

Mass

1638.75

PI

4.07

Net Charge

-1

Boman Index

3.72

Hydrophobicity

-1.027

Evidence 1 Activity

Source & Reference

Database Source dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.