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Peptide record

TPDB48932

Antifungal standard
46 amino acids
Basic Information
3D PDB MODEL
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TPDB48932
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 46-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RCYTNDDCKDGQPCPVPLACLFGSCICPWKSQSKLPICQIICANLD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C217H344N58O65S8
EHM
C
5061.95
5.94
4
4
14
-0
0.97
0.043
78.48
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
7490
1.48
18
Residue Composition
number
2
A
1
R
2
N
4
D
8
C
0
E
3
Q
2
G
0
H
4
I
4
L
3
K
0
M
1
F
5
P
3
S
1
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 1 N: 2 D: 4 C: 8 E: 0 Q: 3 G: 2 H: 0 I: 4 L: 4 K: 3 M: 0 F: 1 P: 5 S: 3 T: 1 W: 1 Y: 1 V: 1
Chemical Descriptors
46 reviewed residue count
C217H344N58O65S8 sequence-only estimate (linear, free termini)
5061.95 sequence-only estimate (linear, free termini)
5.94 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.97 sequence-only estimate (linear, free termini)
0.043 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.