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Peptide record

TPDB48920

Antifungal standard
54 amino acids
Basic Information
3D PDB MODEL
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TPDB48920
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 54-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
LYMCVSSTCVIQWCAIQCKRKEANGIGTCKPRPNQGKIQYRKLKEECHCVYKCS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C266H435N79O75S9
DF
C
6228.40
8.95
11
3
16
+7
1.79
-0.459
63.15
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
10470
1.68
22
Residue Composition
number
2
A
3
R
2
N
0
D
8
C
3
E
4
Q
3
G
1
H
4
I
2
L
7
K
1
M
0
F
2
P
3
S
2
T
1
W
3
Y
3
V
Amino Acid Distribution
A: 2 R: 3 N: 2 D: 0 C: 8 E: 3 Q: 4 G: 3 H: 1 I: 4 L: 2 K: 7 M: 1 F: 0 P: 2 S: 3 T: 2 W: 1 Y: 3 V: 3
Chemical Descriptors
54 reviewed residue count
C266H435N79O75S9 sequence-only estimate (linear, free termini)
6228.40 sequence-only estimate (linear, free termini)
8.95 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
1.79 sequence-only estimate (linear, free termini)
-0.459 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.