TPDB

3D PDB MODEL

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TPDB ID TPDB48911

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 57-aa standard natural antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.

Sequence

FPASDQSIYARCIGPCPRYAVPHWCENECLSRKYMAGGECAFIEGEGPTPRCCCINL

FASTA

>TPDB48911|Antifungal|length=57
FPASDQSIYARCIGPCPRYAVPHWCENECLSRKYMAGGECAFIEGEGPTPRCCCINL

Formula C272H412N76O80S9

Absent Amino Acids

Common Amino Acids C

Mass 6315.26

PI 5.53

Basic Residues 6

Acidic Residues 6

Hydrophobic Residues 19

Net Charge -1

Boman Index 9.00

Hydrophobicity -0.172

Aliphatic Index 54.91

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 10470

Absorbance 280nm 165.79

Polar Residues 18

number

5

A

4

R

2

N

1

D

8

C

5

E

1

Q

5

G

1

H

4

I

2

L

1

K

1

M

2

F

6

P

3

S

1

T

1

W

3

Y

1

V

Amino Acid Distribution

A: 5 R: 4 N: 2 D: 1 C: 8 E: 5 Q: 1 G: 5 H: 1 I: 4 L: 2 K: 1 M: 1 F: 2 P: 6 S: 3 T: 1 W: 1 Y: 3 V: 1

Length

57

Formula

C272H412N76O80S9

Mass

6315.26

PI

5.53

Net Charge

-1

Boman Index

9.00

Hydrophobicity

-0.172

Evidence 1 Activity

Source & Reference

Database Source dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.