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Peptide record

TPDB48910

Antifungal standard
53 amino acids
Basic Information
3D PDB MODEL
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TPDB48910
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 53-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
DQTDKYCTIIIDPRTPCDLVDCRLSCYTGYNGVGKCIASKASRTPNCVCTYNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C244H391N69O81S8
EHMFW
C
5843.68
7.48
6
5
15
+1
1.86
-0.240
64.34
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
6460
1.11
25
Residue Composition
number
2
A
3
R
3
N
5
D
8
C
0
E
1
Q
3
G
0
H
4
I
2
L
3
K
0
M
0
F
3
P
3
S
6
T
0
W
4
Y
3
V
Amino Acid Distribution
A: 2 R: 3 N: 3 D: 5 C: 8 E: 0 Q: 1 G: 3 H: 0 I: 4 L: 2 K: 3 M: 0 F: 0 P: 3 S: 3 T: 6 W: 0 Y: 4 V: 3
Chemical Descriptors
53 reviewed residue count
C244H391N69O81S8 sequence-only estimate (linear, free termini)
5843.68 sequence-only estimate (linear, free termini)
7.48 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.86 sequence-only estimate (linear, free termini)
-0.240 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.