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Peptide record

TPDB48908

Antifungal standard
54 amino acids
Basic Information
3D PDB MODEL
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TPDB48908
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 54-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SEIKPTGRIDDQCKQMCSATYGDGKCASDCRKAGFSSGRCLTSSPFGNKCCCTK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C231H378N72O80S9
HWV
C
5732.52
8.31
9
5
10
+4
2.36
-0.639
27.22
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1990
0.35
23
Residue Composition
number
3
A
3
R
1
N
4
D
8
C
1
E
2
Q
6
G
0
H
2
I
1
L
6
K
1
M
2
F
2
P
7
S
4
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 3 R: 3 N: 1 D: 4 C: 8 E: 1 Q: 2 G: 6 H: 0 I: 2 L: 1 K: 6 M: 1 F: 2 P: 2 S: 7 T: 4 W: 0 Y: 1 V: 0
Chemical Descriptors
54 reviewed residue count
C231H378N72O80S9 sequence-only estimate (linear, free termini)
5732.52 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.36 sequence-only estimate (linear, free termini)
-0.639 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.