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Peptide record

TPDB48901

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB48901
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
QPLGTMERCYDMLTWGECVPDNCAFSCALKRHGKGGCIKAYDNRPACVCYYTCLRS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C268H415N77O79S10
C
6300.31
7.84
8
5
19
+2
1.60
-0.279
52.32
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
11960
1.90
20
Residue Composition
number
4
A
4
R
2
N
3
D
8
C
2
E
1
Q
5
G
1
H
1
I
4
L
3
K
2
M
1
F
3
P
2
S
3
T
1
W
4
Y
2
V
Amino Acid Distribution
A: 4 R: 4 N: 2 D: 3 C: 8 E: 2 Q: 1 G: 5 H: 1 I: 1 L: 4 K: 3 M: 2 F: 1 P: 3 S: 2 T: 3 W: 1 Y: 4 V: 2
Chemical Descriptors
56 reviewed residue count
C268H415N77O79S10 sequence-only estimate (linear, free termini)
6300.31 sequence-only estimate (linear, free termini)
7.84 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.60 sequence-only estimate (linear, free termini)
-0.279 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.