Back to search

Peptide record

TPDB48899

Antifungal standard
52 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB48899
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 52-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
TRIMDASSDCEFKGPCHKKEDCYDSCGVNKPPFNNAICVPGRDSFQCCCILS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C239H372N68O78S9
W
C
5734.53
5.46
7
7
13
-1
1.99
-0.390
45.00
Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour
1990
0.35
19
Residue Composition
number
2
A
2
R
3
N
5
D
8
C
2
E
1
Q
3
G
1
H
3
I
1
L
4
K
1
M
3
F
4
P
5
S
1
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 2 R: 2 N: 3 D: 5 C: 8 E: 2 Q: 1 G: 3 H: 1 I: 3 L: 1 K: 4 M: 1 F: 3 P: 4 S: 5 T: 1 W: 0 Y: 1 V: 2
Chemical Descriptors
52 reviewed residue count
C239H372N68O78S9 sequence-only estimate (linear, free termini)
5734.53 sequence-only estimate (linear, free termini)
5.46 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.99 sequence-only estimate (linear, free termini)
-0.390 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.