TPDB

3D PDB MODEL

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TPDB ID TPDB48896

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 58-aa standard natural antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.

Sequence

IDVHDAMCYRSECTSVCDQICLSHGYTNGWYCGTFRLHTGCCCLKKKELNQIISPSKN

FASTA

>TPDB48896|Antifungal|length=58
IDVHDAMCYRSECTSVCDQICLSHGYTNGWYCGTFRLHTGCCCLKKKELNQIISPSKN

Formula C279H436N80O86S9

Absent Amino Acids

Common Amino Acids C

Mass 6575.56

PI 7.52

Basic Residues 9

Acidic Residues 5

Hydrophobic Residues 17

Net Charge +1

Boman Index 8.85

Hydrophobicity -0.274

Aliphatic Index 65.52

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 10470

Absorbance 280nm 159.23

Polar Residues 25

number

1

A

2

R

3

N

3

D

8

C

2

E

2

Q

4

G

3

H

4

I

4

L

4

K

1

M

1

F

1

P

5

S

4

T

1

W

3

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 3 D: 3 C: 8 E: 2 Q: 2 G: 4 H: 3 I: 4 L: 4 K: 4 M: 1 F: 1 P: 1 S: 5 T: 4 W: 1 Y: 3 V: 2

Length

58

Formula

C279H436N80O86S9

Mass

6575.56

PI

7.52

Net Charge

+1

Boman Index

8.85

Hydrophobicity

-0.274

Evidence 1 Activity

Source & Reference

Database Source dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.