Back to search

Peptide record

TPDB48896

Antifungal standard
58 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB48896
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 58-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
IDVHDAMCYRSECTSVCDQICLSHGYTNGWYCGTFRLHTGCCCLKKKELNQIISPSKN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C279H436N80O86S9
C
6575.56
7.52
9
5
17
+1
1.61
-0.274
65.52
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
10470
1.59
25
Residue Composition
number
1
A
2
R
3
N
3
D
8
C
2
E
2
Q
4
G
3
H
4
I
4
L
4
K
1
M
1
F
1
P
5
S
4
T
1
W
3
Y
2
V
Amino Acid Distribution
A: 1 R: 2 N: 3 D: 3 C: 8 E: 2 Q: 2 G: 4 H: 3 I: 4 L: 4 K: 4 M: 1 F: 1 P: 1 S: 5 T: 4 W: 1 Y: 3 V: 2
Chemical Descriptors
58 reviewed residue count
C279H436N80O86S9 sequence-only estimate (linear, free termini)
6575.56 sequence-only estimate (linear, free termini)
7.52 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.61 sequence-only estimate (linear, free termini)
-0.274 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.