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Peptide record

TPDB48893

Antifungal standard
71 amino acids
Basic Information
3D PDB MODEL
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TPDB48893
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 71-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
VLINGSSDEERTYSFSPRASPFDPRSLNQELKIGRIGYCFDCARACMRRGKYIRTCSFERKLCRYSISDIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C357H570N108O106S6
HW
R
8263.47
9.41
14
8
23
+6
2.89
-0.590
63.24
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
6210
0.75
23
Residue Composition
number
3
A
10
R
2
N
4
D
5
C
4
E
1
Q
4
G
0
H
6
I
4
L
4
K
1
M
4
F
3
P
9
S
2
T
0
W
4
Y
1
V
Amino Acid Distribution
A: 3 R: 10 N: 2 D: 4 C: 5 E: 4 Q: 1 G: 4 H: 0 I: 6 L: 4 K: 4 M: 1 F: 4 P: 3 S: 9 T: 2 W: 0 Y: 4 V: 1
Chemical Descriptors
71 reviewed residue count
C357H570N108O106S6 sequence-only estimate (linear, free termini)
8263.47 sequence-only estimate (linear, free termini)
9.41 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.89 sequence-only estimate (linear, free termini)
-0.590 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.