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Peptide record

TPDB48887

Antifungal standard
60 amino acids
Basic Information
3D PDB MODEL
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TPDB48887
Antifungal
Anti-infective peptides
AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP Peptipedia
standard
No
A 60-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SIFIKYSDRTCHVYIKAENCEIDQCNWECGTKYKRVGVQGLCVPPGFDPIDQACLCSFNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C297H453N79O89S8
M
C
6810.82
5.50
7
7
20
-1
1.41
-0.157
68.17
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
10470
1.54
22
Residue Composition
number
2
A
2
R
3
N
4
D
8
C
3
E
3
Q
4
G
1
H
5
I
2
L
4
K
0
M
3
F
3
P
3
S
2
T
1
W
3
Y
4
V
Amino Acid Distribution
A: 2 R: 2 N: 3 D: 4 C: 8 E: 3 Q: 3 G: 4 H: 1 I: 5 L: 2 K: 4 M: 0 F: 3 P: 3 S: 3 T: 2 W: 1 Y: 3 V: 4
Chemical Descriptors
60 reviewed residue count
C297H453N79O89S8 sequence-only estimate (linear, free termini)
6810.82 sequence-only estimate (linear, free termini)
5.50 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.41 sequence-only estimate (linear, free termini)
-0.157 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.