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Peptide record

TPDB48874

Antifungal standard
87 amino acids
Basic Information
3D PDB MODEL
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TPDB48874
Antifungal
Anti-infective peptides
AFP-GFuse
standard
No
A 87-aa standard-residue antifungal peptide sequence curated from AFP-GFuse, with an available 3D structural model.
Sequence
AINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C431H668N126O133S3
N
9838.99
5.34
9
9
33
-3
1.80
-0.369
89.66
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
19605
1.99
29
Residue Composition
number
5
A
5
R
11
N
3
D
2
C
6
E
3
Q
6
G
3
H
8
I
7
L
1
K
1
M
2
F
3
P
5
S
6
T
3
W
2
Y
5
V
Amino Acid Distribution
A: 5 R: 5 N: 11 D: 3 C: 2 E: 6 Q: 3 G: 6 H: 3 I: 8 L: 7 K: 1 M: 1 F: 2 P: 3 S: 5 T: 6 W: 3 Y: 2 V: 5
Chemical Descriptors
87 reviewed residue count
C431H668N126O133S3 sequence-only estimate (linear, free termini)
9838.99 sequence-only estimate (linear, free termini)
5.34 sequence-only estimate (linear, free termini)
-3 sequence-only estimate (linear, free termini)
1.80 sequence-only estimate (linear, free termini)
-0.369 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA