TPDB

3D PDB MODEL

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TPDB ID TPDB48410

Activity

Antiparasitic

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0

Sequence_Type

standard

Has_Modification No

Description A 25-aa standard natural antiparasitic peptide sequence curated from dbAMP 3.0, with an available 3D structural model.

Sequence

AMVSEFLKQAWFIENEEQEYVQTVK

FASTA

>TPDB48410|Antiparasitic|length=25
AMVSEFLKQAWFIENEEQEYVQTVK

Formula C139H208N32O43S1

Absent Amino Acids RDCGHP

Common Amino Acids E

Mass 3047.43

PI 4.08

Basic Residues 2

Acidic Residues 5

Hydrophobic Residues 12

Net Charge -3

Boman Index 8.23

Hydrophobicity -0.440

Aliphatic Index 74.00

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 229.37

Polar Residues 7

number

2

A

0

R

1

N

0

D

0

C

5

E

3

Q

0

G

0

H

1

I

1

L

2

K

1

M

2

F

0

P

1

S

1

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 2 R: 0 N: 1 D: 0 C: 0 E: 5 Q: 3 G: 0 H: 0 I: 1 L: 1 K: 2 M: 1 F: 2 P: 0 S: 1 T: 1 W: 1 Y: 1 V: 3

Length

25

Formula

C139H208N32O43S1

Mass

3047.43

PI

4.08

Net Charge

-3

Boman Index

8.23

Hydrophobicity

-0.440

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiparasitic	dbAMP 3.0 classified under the Anti-parasitic function class.