TPDB

3D PDB MODEL

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TPDB ID TPDB46835

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 43-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VALDPIDISIVLNKAKSDLEESKEWIRRSNQKLDSIPEGCHOL

FASTA

>TPDB46835|Antiviral|length=43
VALDPIDISIVLNKAKSDLEESKEWIRRSNQKLDSIPEGCHOL

Formula C208H344N58O67S1

Absent Amino Acids MFTY

Common Amino Acids ILS

Mass 4761.43

PI 4.90

Basic Residues 7

Acidic Residues 8

Hydrophobic Residues 15

Net Charge -2

Boman Index 15.88

Hydrophobicity -0.437

Aliphatic Index 108.84

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 115.51

Polar Residues 9

number

2

A

2

R

2

N

4

D

1

C

4

E

1

Q

1

G

1

H

5

I

5

L

4

K

0

M

0

F

2

P

5

S

0

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 2 R: 2 N: 2 D: 4 C: 1 E: 4 Q: 1 G: 1 H: 1 I: 5 L: 5 K: 4 M: 0 F: 0 P: 2 S: 5 T: 0 W: 1 Y: 0 V: 2

Length

43

Formula

C208H344N58O67S1

Mass

4761.43

PI

4.90

Net Charge

-2

Boman Index

15.88

Hydrophobicity

-0.437

Evidence 1 Activity

Source & Reference

Database Source NA