TPDB

3D PDB MODEL

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TPDB ID TPDB46834

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 40-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VALDPIDISIVLNKAKSDLEESKEWIRRSNQKLDSICHOL

FASTA

>TPDB46834|Antiviral|length=40
VALDPIDISIVLNKAKSDLEESKEWIRRSNQKLDSICHOL

Formula C196H327N55O62S1

Absent Amino Acids GMFTY

Common Amino Acids ILS

Mass 4478.14

PI 5.51

Basic Residues 7

Acidic Residues 7

Hydrophobic Residues 15

Net Charge -1

Boman Index 13.40

Hydrophobicity -0.332

Aliphatic Index 117.00

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 122.82

Polar Residues 9

number

2

A

2

R

2

N

4

D

1

C

3

E

1

Q

0

G

1

H

5

I

5

L

4

K

0

M

0

F

1

P

5

S

0

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 2 R: 2 N: 2 D: 4 C: 1 E: 3 Q: 1 G: 0 H: 1 I: 5 L: 5 K: 4 M: 0 F: 0 P: 1 S: 5 T: 0 W: 1 Y: 0 V: 2

Length

40

Formula

C196H327N55O62S1

Mass

4478.14

PI

5.51

Net Charge

-1

Boman Index

13.40

Hydrophobicity

-0.332

Evidence 1 Activity

Source & Reference

Database Source NA