TPDB

3D PDB MODEL

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TPDB ID TPDB46769

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 43-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SLDQINVTFLDLEYEMKKLEEAIKKLEESYIDLKELPEGCHOL

FASTA

>TPDB46769|Antiviral|length=43
SLDQINVTFLDLEYEMKKLEEAIKKLEESYIDLKELPEGCHOL

Formula C223H357N51O72S2

Absent Amino Acids RW

Common Amino Acids EL

Mass 4968.71

PI 4.23

Basic Residues 6

Acidic Residues 11

Hydrophobic Residues 17

Net Charge -6

Boman Index 18.63

Hydrophobicity -0.419

Aliphatic Index 108.84

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 59.98

Polar Residues 8

number

1

A

0

R

1

N

3

D

1

C

8

E

1

Q

1

G

1

H

3

I

8

L

5

K

1

M

1

F

1

P

2

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 3 C: 1 E: 8 Q: 1 G: 1 H: 1 I: 3 L: 8 K: 5 M: 1 F: 1 P: 1 S: 2 T: 1 W: 0 Y: 2 V: 1

Length

43

Formula

C223H357N51O72S2

Mass

4968.71

PI

4.23

Net Charge

-6

Boman Index

18.63

Hydrophobicity

-0.419

Evidence 1 Activity

Source & Reference

Database Source NA