TPDB

3D PDB MODEL

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TPDB ID TPDB46429

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 44-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GTYDHDVYRDEALNNRFQIKGVELKSGYKDWGSGSGCPEGCHOL

FASTA

>TPDB46429|Antiviral|length=44
GTYDHDVYRDEALNNRFQIKGVELKSGYKDWGSGSGCPEGCHOL

Formula C208H310N60O68S2

Absent Amino Acids M

Common Amino Acids G

Mass 4803.23

PI 5.34

Basic Residues 7

Acidic Residues 7

Hydrophobic Residues 12

Net Charge -2

Boman Index 11.66

Hydrophobicity -0.920

Aliphatic Index 50.91

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 10095

Absorbance 280nm 210.17

Polar Residues 12

number

1

A

2

R

2

N

4

D

2

C

3

E

1

Q

7

G

2

H

1

I

3

L

3

K

0

M

1

F

1

P

3

S

1

T

1

W

3

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 2 D: 4 C: 2 E: 3 Q: 1 G: 7 H: 2 I: 1 L: 3 K: 3 M: 0 F: 1 P: 1 S: 3 T: 1 W: 1 Y: 3 V: 2

Length

44

Formula

C208H310N60O68S2

Mass

4803.23

PI

5.34

Net Charge

-2

Boman Index

11.66

Hydrophobicity

-0.920

Evidence 1 Activity

Source & Reference

Database Source NA