TPDB

3D PDB MODEL

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TPDB ID TPDB46425

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 34-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GTYDHDVYRDEALNNRFQIKGGSGSGCPEGCHOL

FASTA

>TPDB46425|Antiviral|length=34
GTYDHDVYRDEALNNRFQIKGGSGSGCPEGCHOL

Formula C151H227N47O52S2

Absent Amino Acids MW

Common Amino Acids G

Mass 3596.87

PI 5.25

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 8

Net Charge -2

Boman Index 9.57

Hydrophobicity -0.891

Aliphatic Index 45.88

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3105

Absorbance 280nm 86.33

Polar Residues 10

number

1

A

2

R

2

N

3

D

2

C

2

E

1

Q

6

G

2

H

1

I

2

L

1

K

0

M

1

F

1

P

2

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 1 R: 2 N: 2 D: 3 C: 2 E: 2 Q: 1 G: 6 H: 2 I: 1 L: 2 K: 1 M: 0 F: 1 P: 1 S: 2 T: 1 W: 0 Y: 2 V: 1

Length

34

Formula

C151H227N47O52S2

Mass

3596.87

PI

5.25

Net Charge

-2

Boman Index

9.57

Hydrophobicity

-0.891

Evidence 1 Activity

Source & Reference

Database Source NA