TPDB

3D PDB MODEL

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TPDB ID TPDB46123

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 18-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ACETYLAIBHYPLVQLOL

FASTA

>TPDB46123|Antiviral|length=18
ACETYLAIBHYPLVQLOL

Formula C87H135N19O23S1

Absent Amino Acids RNDGKMFSW

Common Amino Acids L

Mass 1847.20

PI 5.13

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 10

Net Charge -1

Boman Index -0.79

Hydrophobicity 0.828

Aliphatic Index 135.56

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 161.33

Polar Residues 5

number

2

A

0

R

0

N

0

D

1

C

1

E

1

Q

0

G

1

H

1

I

4

L

0

K

0

M

0

F

1

P

0

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 0 N: 0 D: 0 C: 1 E: 1 Q: 1 G: 0 H: 1 I: 1 L: 4 K: 0 M: 0 F: 0 P: 1 S: 0 T: 1 W: 0 Y: 2 V: 1

Length

18

Formula

C87H135N19O23S1

Mass

1847.20

PI

5.13

Net Charge

-1

Boman Index

-0.79

Hydrophobicity

0.828

Evidence 1 Activity

Source & Reference

Database Source NA