TPDB

3D PDB MODEL

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TPDB ID TPDB46118

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 42-aa modified antiviral peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ACTIEEQROAKTFLDKSPANHEAEDLROAYQSSLASPAWNNH

FASTA

>TPDB46118|Antiviral|length=42
ACTIEEQROAKTFLDKSPANHEAEDLROAYQSSLASPAWNNH

Formula C193H296N58O65S1

Absent Amino Acids GMV

Common Amino Acids A

Mass 4500.88

PI 5.34

Basic Residues 6

Acidic Residues 6

Hydrophobic Residues 14

Net Charge -2

Boman Index 12.84

Hydrophobicity -0.902

Aliphatic Index 53.81

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 155.30

Polar Residues 13

number

7

A

2

R

3

N

2

D

1

C

4

E

2

Q

0

G

2

H

1

I

3

L

2

K

0

M

1

F

2

P

4

S

2

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 7 R: 2 N: 3 D: 2 C: 1 E: 4 Q: 2 G: 0 H: 2 I: 1 L: 3 K: 2 M: 0 F: 1 P: 2 S: 4 T: 2 W: 1 Y: 1 V: 0

Length

42

Formula

C193H296N58O65S1

Mass

4500.88

PI

5.34

Net Charge

-2

Boman Index

12.84

Hydrophobicity

-0.902

Evidence 1 Activity

Source & Reference

Database Source NA