TPDB

3D PDB MODEL

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TPDB ID TPDB45528

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0

Sequence_Type

standard

Has_Modification No

Description A 36-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, with an available 3D structural model.

Sequence

YTSLIHSLIEESQNQQEKNDQELLELDKWASLWNWF

FASTA

>TPDB45528|Antiviral|length=36
YTSLIHSLIEESQNQQEKNDQELLELDKWASLWNWF

Formula C201H296N50O64

Absent Amino Acids RCGMPV

Common Amino Acids L

Mass 4436.86

PI 4.01

Basic Residues 3

Acidic Residues 7

Hydrophobic Residues 14

Net Charge -5

Boman Index 7.97

Hydrophobicity -0.875

Aliphatic Index 89.44

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 17990

Absorbance 280nm 405.47

Polar Residues 13

number

1

A

0

R

3

N

2

D

0

C

5

E

4

Q

0

G

1

H

2

I

6

L

2

K

0

M

1

F

0

P

4

S

1

T

3

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 3 D: 2 C: 0 E: 5 Q: 4 G: 0 H: 1 I: 2 L: 6 K: 2 M: 0 F: 1 P: 0 S: 4 T: 1 W: 3 Y: 1 V: 0

Length

36

Formula

C201H296N50O64

Mass

4436.86

PI

4.01

Net Charge

-5

Boman Index

7.97

Hydrophobicity

-0.875

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.