TPDB

3D PDB MODEL

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TPDB ID TPDB45470

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 33-aa standard natural antiviral peptide sequence curated from dbAMP 3.0 and DRAVP 2.0, with an available 3D structural model.

Sequence

MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAF

FASTA

>TPDB45470|Antiviral|length=33
MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAF

Formula C151H227N39O43S1

Absent Amino Acids RCEPY

Common Amino Acids G

Mass 3308.76

PI 5.10

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 17

Net Charge -1

Boman Index -2.60

Hydrophobicity 0.636

Aliphatic Index 91.82

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 166.23

Polar Residues 5

number

5

A

0

R

1

N

2

D

0

C

0

E

1

Q

7

G

1

H

2

I

3

L

1

K

1

M

3

F

0

P

2

S

1

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 5 R: 0 N: 1 D: 2 C: 0 E: 0 Q: 1 G: 7 H: 1 I: 2 L: 3 K: 1 M: 1 F: 3 P: 0 S: 2 T: 1 W: 1 Y: 0 V: 2

Length

33

Formula

C151H227N39O43S1

Mass

3308.76

PI

5.10

Net Charge

-1

Boman Index

-2.60

Hydrophobicity

0.636

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.