TPDB

3D PDB MODEL

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TPDB ID TPDB45400

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 15-aa modified antiviral peptide sequence curated from dbAMP 3.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

XXLQYAVLRHKRREX

FASTA

>TPDB45400|Antiviral|length=15
XXLQYAVLRHKRREX

Formula C69H117N25O17

Absent Amino Acids NDCGIMFPSTW

Common Amino Acids R

Mass 1568.85

PI 11.30

Basic Residues 5

Acidic Residues 1

Hydrophobic Residues 5

Net Charge +3

Boman Index 4.82

Hydrophobicity -1.020

Aliphatic Index 78.00

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 1490

Absorbance 280nm 94.97

Polar Residues 2

number

1

A

3

R

0

N

0

D

0

C

1

E

1

Q

0

G

1

H

0

I

2

L

1

K

0

M

0

F

0

P

0

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 3 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 0 L: 2 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 1

Length

15

Formula

C69H117N25O17

Mass

1568.85

PI

11.30

Net Charge

+3

Boman Index

4.82

Hydrophobicity

-1.020

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.