TPDB

3D PDB MODEL

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TPDB ID TPDB45377

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 16-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAVP 2.0, and Peptipedia, with an available 3D structural model.

Sequence

RGAHINGRWDSRCHRF

FASTA

>TPDB45377|Antiviral|length=16
RGAHINGRWDSRCHRF

Formula C83H126N34O21S1

Absent Amino Acids EQLKMPTYV

Common Amino Acids R

Mass 1968.19

PI 11.93

Basic Residues 6

Acidic Residues 1

Hydrophobic Residues 4

Net Charge +3

Boman Index 3.26

Hydrophobicity -1.394

Aliphatic Index 30.63

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 279.44

Polar Residues 3

number

1

A

4

R

1

N

1

D

1

C

0

E

0

Q

2

G

2

H

1

I

0

L

0

K

0

M

1

F

0

P

1

S

0

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 4 N: 1 D: 1 C: 1 E: 0 Q: 0 G: 2 H: 2 I: 1 L: 0 K: 0 M: 0 F: 1 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 0

Length

16

Formula

C83H126N34O21S1

Mass

1968.19

PI

11.93

Net Charge

+3

Boman Index

3.26

Hydrophobicity

-1.394

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.