TPDB

3D PDB MODEL

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TPDB ID TPDB45358

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 93-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MIVIVAYDISDEDRRGRLRRYLRRLGLARVNRSVYAGPGTATTAELVAERAKEIVEEGDSVFVIVVREDEYQRAHVFDGRDYYIVSERKYEVY

FASTA

>TPDB45358|Antiviral|length=93
MIVIVAYDISDEDRRGRLRRYLRRLGLARVNRSVYAGPGTATTAELVAERAKEIVEEGDSVFVIVVREDEYQRAHVFDGRDYYIVSERKYEVY

Formula C480H763N141O145S1

Absent Amino Acids CW

Common Amino Acids R

Mass 10861.26

PI 5.78

Basic Residues 17

Acidic Residues 17

Hydrophobic Residues 43

Net Charge -1

Boman Index 30.42

Hydrophobicity -0.405

Aliphatic Index 95.27

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 11920

Absorbance 280nm 109.75

Polar Residues 17

number

8

A

14

R

1

N

7

D

0

C

10

E

1

Q

6

G

1

H

6

I

5

L

2

K

1

M

2

F

1

P

4

S

3

T

0

W

8

Y

13

V

Amino Acid Distribution

A: 8 R: 14 N: 1 D: 7 C: 0 E: 10 Q: 1 G: 6 H: 1 I: 6 L: 5 K: 2 M: 1 F: 2 P: 1 S: 4 T: 3 W: 0 Y: 8 V: 13

Length

93

Formula

C480H763N141O145S1

Mass

10861.26

PI

5.78

Net Charge

-1

Boman Index

30.42

Hydrophobicity

-0.405

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.