TPDB

3D PDB MODEL

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TPDB ID TPDB45352

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 91-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MVVTVYLLIVYDVGVERVNRVKSYLRTELHWVQNSVFEGEVTESQFRRIETNLERIIDRERDSVIIYSFRSERAMNRNVLGLEKSPLDVIL

FASTA

>TPDB45352|Antiviral|length=91
MVVTVYLLIVYDVGVERVNRVKSYLRTELHWVQNSVFEGEVTESQFRRIETNLERIIDRERDSVIIYSFRSERAMNRNVLGLEKSPLDVIL

Formula C481H778N136O142S2

Absent Amino Acids C

Common Amino Acids V

Mass 10802.41

PI 5.75

Basic Residues 14

Acidic Residues 14

Hydrophobic Residues 41

Net Charge -1

Boman Index 26.32

Hydrophobicity -0.141

Aliphatic Index 114.29

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 11460

Absorbance 280nm 106.09

Polar Residues 22

number

1

A

11

R

5

N

4

D

0

C

10

E

2

Q

3

G

1

H

7

I

9

L

2

K

2

M

3

F

1

P

7

S

4

T

1

W

4

Y

14

V

Amino Acid Distribution

A: 1 R: 11 N: 5 D: 4 C: 0 E: 10 Q: 2 G: 3 H: 1 I: 7 L: 9 K: 2 M: 2 F: 3 P: 1 S: 7 T: 4 W: 1 Y: 4 V: 14

Length

91

Formula

C481H778N136O142S2

Mass

10802.41

PI

5.75

Net Charge

-1

Boman Index

26.32

Hydrophobicity

-0.141

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.