TPDB

3D PDB MODEL

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TPDB ID TPDB45350

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 95-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MAVFLIAYDLVNERRGTHDYQPLWDELKRLGAHRTQFSLWLVSANNTTAEVRQHFQQFVDSNDRIWVTRLRKSQYDYANAIGGTNNWLSNNPPEA

FASTA

>TPDB45350|Antiviral|length=95
MAVFLIAYDLVNERRGTHDYQPLWDELKRLGAHRTQFSLWLVSANNTTAEVRQHFQQFVDSNDRIWVTRLRKSQYDYANAIGGTNNWLSNNPPEA

Formula C497H750N146O146S1

Absent Amino Acids C

Common Amino Acids NL

Mass 11138.37

PI 7.85

Basic Residues 13

Acidic Residues 10

Hydrophobic Residues 39

Net Charge +0

Boman Index 14.12

Hydrophobicity -0.673

Aliphatic Index 76.00

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 27960

Absorbance 280nm 251.02

Polar Residues 30

number

8

A

8

R

9

N

6

D

0

C

4

E

6

Q

4

G

3

H

3

I

9

L

2

K

1

M

4

F

3

P

5

S

6

T

4

W

4

Y

6

V

Amino Acid Distribution

A: 8 R: 8 N: 9 D: 6 C: 0 E: 4 Q: 6 G: 4 H: 3 I: 3 L: 9 K: 2 M: 1 F: 4 P: 3 S: 5 T: 6 W: 4 Y: 4 V: 6

Length

95

Formula

C497H750N146O146S1

Mass

11138.37

PI

7.85

Net Charge

+0

Boman Index

14.12

Hydrophobicity

-0.673

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.