TPDB

3D PDB MODEL

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TPDB ID TPDB45349

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 87-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MYVVIVYDVGVERVNKVRSFLREYMNWVQNSVFEGELTKAEFLKIKSRLKELIQESSDHIIFYSSRDRKYLGIEDLGTPKADTSNII

FASTA

>TPDB45349|Antiviral|length=87
MYVVIVYDVGVERVNKVRSFLREYMNWVQNSVFEGELTKAEFLKIKSRLKELIQESSDHIIFYSSRDRKYLGIEDLGTPKADTSNII

Formula C462H731N121O136S2

Absent Amino Acids C

Common Amino Acids V

Mass 10220.74

PI 7.57

Basic Residues 14

Acidic Residues 13

Hydrophobic Residues 38

Net Charge +0

Boman Index 22.21

Hydrophobicity -0.277

Aliphatic Index 99.54

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12950

Absorbance 280nm 126.70

Polar Residues 22

number

2

A

6

R

4

N

5

D

0

C

8

E

2

Q

4

G

1

H

8

I

7

L

7

K

2

M

4

F

1

P

8

S

3

T

1

W

5

Y

9

V

Amino Acid Distribution

A: 2 R: 6 N: 4 D: 5 C: 0 E: 8 Q: 2 G: 4 H: 1 I: 8 L: 7 K: 7 M: 2 F: 4 P: 1 S: 8 T: 3 W: 1 Y: 5 V: 9

Length

87

Formula

C462H731N121O136S2

Mass

10220.74

PI

7.57

Net Charge

+0

Boman Index

22.21

Hydrophobicity

-0.277

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.