TPDB

3D PDB MODEL

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TPDB ID TPDB45345

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 95-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MEHLYIVSYDIRNQRRWRRLFKTMHGFGCWLQLSVFQCRLDRIRIIKMEAAINEIVNHAEDHVLILDLGPAENVKPKVSSIGKTFDPILRQAVIV

FASTA

>TPDB45345|Antiviral|length=95
MEHLYIVSYDIRNQRRWRRLFKTMHGFGCWLQLSVFQCRLDRIRIIKMEAAINEIVNHAEDHVLILDLGPAENVKPKVSSIGKTFDPILRQAVIV

Formula C504H809N145O132S5

Absent Amino Acids

Common Amino Acids I

Mass 11172.16

PI 9.79

Basic Residues 18

Acidic Residues 10

Hydrophobic Residues 44

Net Charge +4

Boman Index 18.51

Hydrophobicity -0.032

Aliphatic Index 111.79

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 14105

Absorbance 280nm 126.25

Polar Residues 18

number

5

A

9

R

4

N

5

D

2

C

5

E

4

Q

4

G

4

H

11

I

9

L

5

K

3

M

4

F

3

P

4

S

2

T

2

W

2

Y

8

V

Amino Acid Distribution

A: 5 R: 9 N: 4 D: 5 C: 2 E: 5 Q: 4 G: 4 H: 4 I: 11 L: 9 K: 5 M: 3 F: 4 P: 3 S: 4 T: 2 W: 2 Y: 2 V: 8

Length

95

Formula

C504H809N145O132S5

Mass

11172.16

PI

9.79

Net Charge

+4

Boman Index

18.51

Hydrophobicity

-0.032

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.