TPDB

3D PDB MODEL

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TPDB ID TPDB45344

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 87-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MFVVLVYDTAAERNPNALRTCRKYLHWVQRSVFEGELSAAQYRALMTTLRDQLDLTYDSIRVYRTRSPALVETEWLGVPLGNQDSVL

FASTA

>TPDB45344|Antiviral|length=87
MFVVLVYDTAAERNPNALRTCRKYLHWVQRSVFEGELSAAQYRALMTTLRDQLDLTYDSIRVYRTRSPALVETEWLGVPLGNQDSVL

Formula C449H708N126O132S3

Absent Amino Acids

Common Amino Acids L

Mass 10079.51

PI 7.16

Basic Residues 11

Acidic Residues 10

Hydrophobic Residues 40

Net Charge +0

Boman Index 13.13

Hydrophobicity -0.206

Aliphatic Index 96.32

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 18450

Absorbance 280nm 183.04

Polar Residues 25

number

7

A

9

R

3

N

5

D

1

C

5

E

4

Q

3

G

1

H

1

I

12

L

1

K

2

M

2

F

3

P

5

S

7

T

2

W

5

Y

9

V

Amino Acid Distribution

A: 7 R: 9 N: 3 D: 5 C: 1 E: 5 Q: 4 G: 3 H: 1 I: 1 L: 12 K: 1 M: 2 F: 2 P: 3 S: 5 T: 7 W: 2 Y: 5 V: 9

Length

87

Formula

C449H708N126O132S3

Mass

10079.51

PI

7.16

Net Charge

+0

Boman Index

13.13

Hydrophobicity

-0.206

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.