TPDB

3D PDB MODEL

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TPDB ID TPDB45337

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 88-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MPYLIVTYDIAEERVNKVRKILKKYFMWVQNSVFEGEITEGKLLKCKLELEKVIDKEVDSVYFYSLENRLNYRKTVLGIEKEITGNIL

FASTA

>TPDB45337|Antiviral|length=88
MPYLIVTYDIAEERVNKVRKILKKYFMWVQNSVFEGEITEGKLLKCKLELEKVIDKEVDSVYFYSLENRLNYRKTVLGIEKEITGNIL

Formula C481H772N118O136S3

Absent Amino Acids H

Common Amino Acids EK

Mass 10480.31

PI 8.56

Basic Residues 15

Acidic Residues 14

Hydrophobic Residues 40

Net Charge +1

Boman Index 24.96

Hydrophobicity -0.224

Aliphatic Index 110.57

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 14440

Absorbance 280nm 137.78

Polar Residues 20

number

1

A

4

R

5

N

3

D

1

C

11

E

1

Q

4

G

0

H

8

I

10

L

11

K

2

M

3

F

1

P

3

S

4

T

1

W

6

Y

9

V

Amino Acid Distribution

A: 1 R: 4 N: 5 D: 3 C: 1 E: 11 Q: 1 G: 4 H: 0 I: 8 L: 10 K: 11 M: 2 F: 3 P: 1 S: 3 T: 4 W: 1 Y: 6 V: 9

Length

88

Formula

C481H772N118O136S3

Mass

10480.31

PI

8.56

Net Charge

+1

Boman Index

24.96

Hydrophobicity

-0.224

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.