TPDB

3D PDB MODEL

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TPDB ID TPDB45328

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 91-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MYVVVAYDITEDEVRNKVADALKAYGLERIQRSVFVGRINPALLKDLVERLKRITKGANADITIFKVDRRAIDTAIRIGPPPPARKNVDLY

FASTA

>TPDB45328|Antiviral|length=91
MYVVVAYDITEDEVRNKVADALKAYGLERIQRSVFVGRINPALLKDLVERLKRITKGANADITIFKVDRRAIDTAIRIGPPPPARKNVDLY

Formula C462H765N133O130S1

Absent Amino Acids CHW

Common Amino Acids ARV

Mass 10295.03

PI 10.13

Basic Residues 17

Acidic Residues 12

Hydrophobic Residues 43

Net Charge +5

Boman Index 24.23

Hydrophobicity -0.171

Aliphatic Index 111.43

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5960

Absorbance 280nm 57.89

Polar Residues 14

number

10

A

10

R

4

N

8

D

0

C

4

E

1

Q

4

G

0

H

9

I

7

L

7

K

1

M

2

F

5

P

1

S

4

T

0

W

4

Y

10

V

Amino Acid Distribution

A: 10 R: 10 N: 4 D: 8 C: 0 E: 4 Q: 1 G: 4 H: 0 I: 9 L: 7 K: 7 M: 1 F: 2 P: 5 S: 1 T: 4 W: 0 Y: 4 V: 10

Length

91

Formula

C462H765N133O130S1

Mass

10295.03

PI

10.13

Net Charge

+5

Boman Index

24.23

Hydrophobicity

-0.171

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.