TPDB

3D PDB MODEL

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TPDB ID TPDB45327

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 91-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MILIYDINTEDNDGKRRLVKIMKTSRKYLSHVQKSVFEGDITEGQISLLKKEIMAIVNMKKDFVIIYSLRDGVKLNREILTDTPDPTDNFL

FASTA

>TPDB45327|Antiviral|length=91
MILIYDINTEDNDGKRRLVKIMKTSRKYLSHVQKSVFEGDITEGQISLLKKEIMAIVNMKKDFVIIYSLRDGVKLNREILTDTPDPTDNFL

Formula C471H777N125O141S4

Absent Amino Acids CW

Common Amino Acids I

Mass 10575.34

PI 9.16

Basic Residues 16

Acidic Residues 14

Hydrophobic Residues 37

Net Charge +1

Boman Index 26.44

Hydrophobicity -0.312

Aliphatic Index 105.93

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 4470

Absorbance 280nm 42.27

Polar Residues 21

number

1

A

5

R

5

N

9

D

0

C

5

E

2

Q

4

G

1

H

11

I

9

L

10

K

4

M

3

F

2

P

5

S

6

T

0

W

3

Y

6

V

Amino Acid Distribution

A: 1 R: 5 N: 5 D: 9 C: 0 E: 5 Q: 2 G: 4 H: 1 I: 11 L: 9 K: 10 M: 4 F: 3 P: 2 S: 5 T: 6 W: 0 Y: 3 V: 6

Length

91

Formula

C471H777N125O141S4

Mass

10575.34

PI

9.16

Net Charge

+1

Boman Index

26.44

Hydrophobicity

-0.312

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.