TPDB

3D PDB MODEL

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TPDB ID TPDB45321

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 DRAMP Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 94-aa standard natural antiviral peptide sequence curated from dbAMP 3.0, DRAMP, and Peptipedia, with an available 3D structural model.

Sequence

MLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII

FASTA

>TPDB45321|Antiviral|length=94
MLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII

Formula C496H787N125O138S4

Absent Amino Acids H

Common Amino Acids L

Mass 10837.70

PI 9.20

Basic Residues 13

Acidic Residues 10

Hydrophobic Residues 42

Net Charge +3

Boman Index 13.66

Hydrophobicity -0.065

Aliphatic Index 98.51

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 13075

Absorbance 280nm 120.64

Polar Residues 25

number

5

A

5

R

2

N

5

D

2

C

5

E

5

Q

5

G

0

H

8

I

10

L

8

K

2

M

5

F

4

P

4

S

7

T

1

W

5

Y

6

V

Amino Acid Distribution

A: 5 R: 5 N: 2 D: 5 C: 2 E: 5 Q: 5 G: 5 H: 0 I: 8 L: 10 K: 8 M: 2 F: 5 P: 4 S: 4 T: 7 W: 1 Y: 5 V: 6

Length

94

Formula

C496H787N125O138S4

Mass

10837.70

PI

9.20

Net Charge

+3

Boman Index

13.66

Hydrophobicity

-0.065

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.