TPDB

3D PDB MODEL

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TPDB ID TPDB45310

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 9-aa standard natural antiviral peptide sequence curated from dbAMP 3.0 and Peptipedia, with an available 3D structural model.

Sequence

LWVGGGRNA

FASTA

>TPDB45310|Antiviral|length=9
LWVGGGRNA

Formula C41H64N14O11

Absent Amino Acids DCEQHIKMFPSTY

Common Amino Acids G

Mass 929.05

PI 11.05

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 4

Net Charge +1

Boman Index -1.25

Hydrophobicity -0.033

Aliphatic Index 86.67

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 592.00

Polar Residues 1

number

1

A

1

R

1

N

0

D

0

C

0

E

0

Q

3

G

0

H

0

I

1

L

0

K

0

M

0

F

0

P

0

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 3 H: 0 I: 0 L: 1 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 1

Length

9

Formula

C41H64N14O11

Mass

929.05

PI

11.05

Net Charge

+1

Boman Index

-1.25

Hydrophobicity

-0.033

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.