TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB45277

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 23-aa modified antiviral peptide sequence curated from dbAMP 3.0 and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

XLQELLGQWLKDGGPSSGRPPPS

FASTA

>TPDB45277|Antiviral|length=23
XLQELLGQWLKDGGPSSGRPPPS

Formula C103H163N29O32

Absent Amino Acids ANCHIMFTYV

Common Amino Acids GLP

Mass 2319.60

PI 7.01

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 5

Net Charge +0

Boman Index 4.35

Hydrophobicity -0.804

Aliphatic Index 67.83

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 5500

Absorbance 280nm 237.11

Polar Residues 5

number

0

A

1

R

0

N

1

D

0

C

1

E

2

Q

4

G

0

H

0

I

4

L

1

K

0

M

0

F

4

P

3

S

0

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 1 C: 0 E: 1 Q: 2 G: 4 H: 0 I: 0 L: 4 K: 1 M: 0 F: 0 P: 4 S: 3 T: 0 W: 1 Y: 0 V: 0

Length

23

Formula

C103H163N29O32

Mass

2319.60

PI

7.01

Net Charge

+0

Boman Index

4.35

Hydrophobicity

-0.804

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.