TPDB

3D PDB MODEL

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TPDB ID TPDB45275

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 33-aa modified antiviral peptide sequence curated from dbAMP 3.0 and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

XKFACPECPKRFMRSDHLSKHITLHELLGEERR

FASTA

>TPDB45275|Antiviral|length=33
XKFACPECPKRFMRSDHLSKHITLHELLGEERR

Formula C168H271N53O46S3

Absent Amino Acids NQWYV

Common Amino Acids REL

Mass 3865.51

PI 9.08

Basic Residues 10

Acidic Residues 5

Hydrophobic Residues 9

Net Charge +2

Boman Index 14.02

Hydrophobicity -0.870

Aliphatic Index 62.12

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 125

Absorbance 280nm 3.23

Polar Residues 5

number

1

A

4

R

0

N

1

D

2

C

4

E

0

Q

1

G

3

H

1

I

4

L

3

K

1

M

2

F

2

P

2

S

1

T

0

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 4 N: 0 D: 1 C: 2 E: 4 Q: 0 G: 1 H: 3 I: 1 L: 4 K: 3 M: 1 F: 2 P: 2 S: 2 T: 1 W: 0 Y: 0 V: 0

Length

33

Formula

C168H271N53O46S3

Mass

3865.51

PI

9.08

Net Charge

+2

Boman Index

14.02

Hydrophobicity

-0.870

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.