TPDB

3D PDB MODEL

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TPDB ID TPDB45216

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 76-aa standard natural antiviral peptide sequence curated from dbAMP 3.0 and Peptipedia, with an available 3D structural model.

Sequence

EPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVRDSMKHLDQIFQNLKP

FASTA

>TPDB45216|Antiviral|length=76
EPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVRDSMKHLDQIFQNLKP

Formula C393H639N113O113S5

Absent Amino Acids

Common Amino Acids I

Mass 8915.39

PI 9.10

Basic Residues 14

Acidic Residues 9

Hydrophobic Residues 25

Net Charge +4

Boman Index 24.31

Hydrophobicity -0.551

Aliphatic Index 83.29

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 7240

Absorbance 280nm 81.21

Polar Residues 22

number

2

A

6

R

4

N

4

D

4

C

5

E

5

Q

1

G

1

H

9

I

3

L

7

K

1

M

3

F

6

P

4

S

4

T

1

W

1

Y

5

V

Amino Acid Distribution

A: 2 R: 6 N: 4 D: 4 C: 4 E: 5 Q: 5 G: 1 H: 1 I: 9 L: 3 K: 7 M: 1 F: 3 P: 6 S: 4 T: 4 W: 1 Y: 1 V: 5

Length

76

Formula

C393H639N113O113S5

Mass

8915.39

PI

9.10

Net Charge

+4

Boman Index

24.31

Hydrophobicity

-0.551

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.