TPDB

3D PDB MODEL

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TPDB ID TPDB45156

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AVPpred-BWR Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 40-aa standard natural antiviral peptide sequence curated from AVPpred-BWR and Peptipedia, with an available 3D structural model.

Sequence

PTTFMLKYDENGTITDAVDCIQKEIDRLNEVAKNLNESLI

FASTA

>TPDB45156|Antiviral|length=40
PTTFMLKYDENGTITDAVDCIQKEIDRLNEVAKNLNESLI

Formula C197H321N51O68S2

Absent Amino Acids HW

Common Amino Acids NDEILT

Mass 4556.14

PI 4.06

Basic Residues 4

Acidic Residues 8

Hydrophobic Residues 15

Net Charge -4

Boman Index 13.97

Hydrophobicity -0.405

Aliphatic Index 97.50

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 1490

Absorbance 280nm 32.70

Polar Residues 12

number

2

A

1

R

4

N

4

D

1

C

4

E

1

Q

1

G

0

H

4

I

4

L

3

K

1

M

1

F

1

P

1

S

4

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 2 R: 1 N: 4 D: 4 C: 1 E: 4 Q: 1 G: 1 H: 0 I: 4 L: 4 K: 3 M: 1 F: 1 P: 1 S: 1 T: 4 W: 0 Y: 1 V: 2

Length

40

Formula

C197H321N51O68S2

Mass

4556.14

PI

4.06

Net Charge

-4

Boman Index

13.97

Hydrophobicity

-0.405

Evidence 1 Activity

Source & Reference

Database Source NA