TPDB

3D PDB MODEL

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TPDB ID TPDB44879

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

NDITLNNSVALDPIDISIELNKAKSDLEESKEWIR

FASTA

>TPDB44879|Antiviral|length=35
NDITLNNSVALDPIDISIELNKAKSDLEESKEWIR

Formula C173H284N46O61

Absent Amino Acids CQGHMFY

Common Amino Acids I

Mass 3984.43

PI 4.06

Basic Residues 4

Acidic Residues 8

Hydrophobic Residues 13

Net Charge -4

Boman Index 13.66

Hydrophobicity -0.546

Aliphatic Index 114.29

Half Life

Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 138.04

Polar Residues 9

number

2

A

1

R

4

N

4

D

0

C

4

E

0

Q

0

G

0

H

5

I

4

L

3

K

0

M

0

F

1

P

4

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 1 N: 4 D: 4 C: 0 E: 4 Q: 0 G: 0 H: 0 I: 5 L: 4 K: 3 M: 0 F: 0 P: 1 S: 4 T: 1 W: 1 Y: 0 V: 1

Length

35

Formula

C173H284N46O61

Mass

3984.43

PI

4.06

Net Charge

-4

Boman Index

13.66

Hydrophobicity

-0.546

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.