TPDB

3D PDB MODEL

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TPDB ID TPDB44877

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 34-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, and Peptipedia, with an available 3D structural model.

Sequence

DLSNQINSINKSLKSAEDWIADSNFFANQARTAK

FASTA

>TPDB44877|Antiviral|length=34
DLSNQINSINKSLKSAEDWIADSNFFANQARTAK

Formula C164H258N48O56

Absent Amino Acids CGHMPYV

Common Amino Acids ANS

Mass 3798.14

PI 7.06

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 13

Net Charge +0

Boman Index 6.53

Hydrophobicity -0.724

Aliphatic Index 72.06

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 144.81

Polar Residues 13

number

5

A

1

R

5

N

3

D

0

C

1

E

2

Q

0

G

0

H

3

I

2

L

3

K

0

M

2

F

0

P

5

S

1

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 5 R: 1 N: 5 D: 3 C: 0 E: 1 Q: 2 G: 0 H: 0 I: 3 L: 2 K: 3 M: 0 F: 2 P: 0 S: 5 T: 1 W: 1 Y: 0 V: 0

Length

34

Formula

C164H258N48O56

Mass

3798.14

PI

7.06

Net Charge

+0

Boman Index

6.53

Hydrophobicity

-0.724

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.